Table 2 GeoChip 5.0 probe data displaying the top-25 most abundant (proxied by probe intensity) genes in May and June sediment from Barrow, Alaska
From: A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
Gene category | Probe Origin | May Signal | June Signal | Geochip gene name |
|---|---|---|---|---|
Virulence | Phytophthora ramorum | 5384.2278 | 3067.5303 | INF1_elicitin_Oomycetes |
Virulence | Phytophthora boehmeriae | 2995.661 | 150.4736 | INF1_elicitin_Oomycetes |
Carbon cycling | Phytophthora infestans | 2284.1703 | 4777.8158 | pectate_lyase_Oomycetes |
Virulence | Phytophthora infestans | 2100.9598 | 4227.5515 | PcF_Oomycetes |
Carbon cycling | Phytophthora infestans | 1271.4373 | 744.2255 | pectate_lyase_Oomycetes |
Virulence | Phytophthora sojae | 1169.2235 | 1060.4361 | INF1_elicitin_Oomycetes |
Virulence | Hyaloperonospora parasitica | 968.5541 | 764.7643 | ATR13_Oomycetes |
Virulence | Phytophthora citrophthora | 919.4098 | 1041.0091 | INF1_elicitin_Oomycetes |
Virulence | Phytophthora brassicae | 900.5573 | 668.7791 | INF1_elicitin_Oomycetes |
Virulence | Phytophthora sojae | 822.8056 | 575.416 | necrosis_Oomycetes |
Virulence | Phytophthora infestans | 787.8103 | 842.6593 | AVR1_Oomycetes |
Carbon cycling | Phytophthora capsici | 758.0665 | 769.5996 | Pg_Oomycetes |
Virulence | Phytophthora infestans | 554.6938 | 469.7703 | serine_protease_inhibitor_Oomycetes |
Virulence | Phytophthora cinnamomi | 511.2635 | 861.0117 | glucanase_inhibitor_Oomycetes |
Carbon cycling | Phytophthora infestans | 485.5348 | 344.3584 | pectin_lyase_Oomycetes |
Carbon cycling | Phytophthora parasitica | 464.4053 | 293.4849 | Pg_Oomycetes |
Virulence | Phytophthora sojae | 454.0621 | 375.3379 | INF1_elicitin_Oomycetes |
Carbon cycling | Phytophthora sojae | 434.6085 | 1559.3231 | mannanase |
Virulence | Phytophthora ramorum | 420.739 | 456.169 | INF1_elicitin_Oomycetes |
Carbon cycling | Phytophthora cinnamomi | 409.9356 | 375.8736 | Pg_Oomycetes |
Carbon cycling | Phytophthora infestans | 403.822 | 532.2254 | pectate_lyase_Oomycetes |
Virulence | Phytophthora infestans | 397.5013 | 356.1048 | necrosis_Oomycetes |
Carbon cycling | Phytophthora infestans | 372.6894 | 289.1474 | chitin_synthase_protist |
Carbon cycling | Phytophthora infestans | 365.5732 | 589.2046 | xylose_isomerase_Oomycetes |
Virulence | Phytophthora brassicae | 362.6233 | 242.5819 | INF1_elicitin_Oomycetes |